Hi! @pkmnsandy I met the same problem with u, how did u solve it?
Hi @linzy35,
I've moved your question to a new topic, as this is most likely a separate issue than what the original post was related to.
Please provide us with the following details so that we can assist you with this:
- Version of QIIME 2 you are running, and how it is installed (e.g. Virtualbox, conda, etc.)
- What is the exact command or commands you ran? Copy and paste please.
- What is the exact error message, if applicable? If you didn't run the command with the
--verbose
flag, please re-run and copy-and-paste the results.
Thanks!
Hi @lizgehret ,
Thanks for helping, here are the details:
-
Version of QIIME 2 you are running, and how it is installed (e.g. Virtualbox, conda, etc.
The vesion of QIIME 2 I' m trying to install is qiime2-2022.0, which is (or will be) installed under the guidence of this -
What is the exact command or commands you ran? Copy and paste please.
wget https://data.qiime2.org/distro/core/qiime2-2022.2-py38-linux-conda.yml
conda env create -n qiime2-2022.2 --file qiime2-2022.2-py38-linux-conda.yml
(The second line of the above codes causes an error, detailed as follows)
- What is the exact error message, if applicable? If you didn't run the command with the
--verbose
flag, please re-run and copy-and-paste the results.
This is the error log👇
nohup.out.txt (3.8 MB)
Thanks for your kindness!
(BTW, those codes below works fine, and I'm now using qiime2-2021.2, it's good)
wget -c https://data.qiime2.org/distro/core/qiime2-2021.2-py36-linux-conda.yml
conda env create -n qiime2-2021.2 --file qiime2-2021.2-py36-linux-conda.yml
Hi @linzy35,
Thanks for providing those details and associated error log - I am glad that 2021.2 is working for you, but you should be able to install the latest version of QIIME 2 without any issues as well.
So just to clarify, are you installing QIIME 2 via conda? And what operating system are you using for all of this (Windows, OSX, Linux)?
Hi @lizgehret,
Sorry for a late reply.
Indeed, I was trying to install QIIME 2 via miniconda3, and the operating system is Ubuntu 20.04.4 LTS, on a shared linux server.
Thanks!
Hi @linzy35,
Thanks for providing those details! We just released QIIME 2 2022.8 - can you try installing this version in a new conda environment and let us know if you are successful? If not, please copy/paste the entire output from your terminal in your response. Thanks!
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