Tutorial from Github on filtering 16S V4 using q2-fragment-insertion


I have used QIIME2 and now, I am getting myself familiar for Qiita. I am currently in the process of preparing my data from V3-V4 to only V4 region for meta-analyses on Qiita.

I have checked the previous question on how to do this and I found this. It suggested to use the q2-fragment-insertion. I have go to the link in the Github to learn the tutorial but I do not really understand on how it works - which file to download, which file to open, how to open, etc. Any help would be much appreaciated. Thanks!


Hello Lilian,

Check out the documentation for q2-fragment-insertion in the Qiime2 library. That includes a tutorial with example commands.

Start with that, and let us know if you have any questions about that tutorial or how to apply it to your data.


This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.