Hi Tech support,
I have been trying to do this part of QIIME pipeline and so far I have encoutered this problem today.
Can you help me out on this one?
qiime tools import
After running this in the terminal, the log comes like this…
Usage: qiime tools import [OPTIONS]
Import data to create a new QIIME 2 Artifact. See https://docs.qiime2.org/
for usage examples and details on the file types and associated semantic
types that can be imported.
–type TEXT The semantic type of the artifact that will be
created upon importing. Use --show-importable-types
to see what importable semantic types are available
in the current deployment. [required]
–input-path PATH Path to file or directory that should be imported.
–output-path ARTIFACT Path where output artifact should be written.
–input-format TEXT The format of the data to be imported. If not
provided, data must be in the format expected by the
semantic type provided via --type.
–show-importable-types Show the semantic types that can be supplied to
–type to import data into an artifact.
Show formats that can be supplied to --input-format
to import data into an artifact.
–help Show this message and exit.
There were some problems with the command:
(1/2) Missing option “–input-path”.
(2/2) Missing option “–output-path”.
./10.Obtain.sh: 11: ./10.Obtain.sh: --input-path: not found