Hi guys,
I’m having an issue I’m trying to solve for the last 3 days, unsuccessfully (qiime2, v2018.11).
I’m running:
qiime feature-classifier classify-sklearn --i-classifier silva-132-99-515-806-nb-classifier.qza --i-reads combined_rep_seqs.qza --o-classification taxonomy.qza
and after 10 minutes, I’m getting this error:
> zsh: killed qiime feature-classifier classify-sklearn --i-classifier --i-reads
My machine has 35 GB memory and 4 GB of Swap, and it seems that the process drains the memory, and then just killed. Any thoughts? it’s only occurred once, and only with this command.
I also tried to use smaller rep-seqs.qza file (400 KB instead of 1900 KB), but still getting the same error.
Thank you,
Barak