I need a bit of assistance at attempting to summarize my “misses” OTU table after filtering sequences that matched less than 80% with the UNITE database. This has been recommended to me to check the total number of sequences are were filtered out of my samples. Below is the code that generated the “misses” file, as well as a screen shot that includes the summarized format. How can I summarize this table in qiime2 to visualize the total number of sequences filtered out?
qiime quality-control exclude-seqs