I’d like to use SILVA to classify my sequences. I downloaded the SILVA reference from the Nov 2016 post and it doesn’t seem to be compatible with this release of qiime2.
qiime feature-classifier classify-sklearn --i-classifier Silva/silva-119-99-full-length-nb-classifier.qza --i-reads rep-seqsMerged_050317_270.qza --o-classification taxonomyMerged_050317_270SILVA.qza Plugin error from feature-classifier: The scikit-learn version could not be determined for this artifact, please retrain your classifier for your current deployment to prevent data-corruption errors.
I’d prefer to train the classifier myself to my region (V3V4). Are the files to train the classifier available?