Should q2-picrust2 and picrust2 run alone should return the same output?

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Hey guys,

I wanted to know if the picrust runned inside qiime2 and runned outside qiime2 should return the same output. Because I have runned them in both ways and I got two different results from the same input files - when converting in the script biom_to_stamp.py.

Best regards

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Hello @Liviacmg,

If the versions are the same and the data and parameters passed to each are the same, then yes (I assume). If you have an example of this not working, you can share all the relevant information here, and you could open an issue on the q2-picrust2 GitHub page.

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