jwdebelius
March 19, 2020, 1:46pm
2
Hi @adammt ,
Welcome to the
I think you're looking for the feature table. This maps the counts present in a sample to the feature ID. If you convert that to a binary table, you'll ge ta one where the feature present and a 0 otherwise.
There's a simple example here, about midway down
I am a beginner in bioinformatics. As far as I know, there are three ways to generate feature table in qiime2:
dada2
delur
3)the method of dereplicate-sequences in q2-vesearch
I’m not sure whether the feature table generated by these three methods is the same thing. These three should be the same. If so, **feature table is nothing but dereplicate-sequences？ **
Some people said that feature table is different from OTUs and can be regarded as 100% OTUs. I know that OTU is the result of …
Best,
forum!