How are you? Happy new year!!
I am analyzing my samples with Ion Torrent sequencer and have the following question. The thing is that the kit sequences 7 hypervariable regions and I want to compare the results I get in Qiime2 (about those 7 regions) with the ones obtained using the Ion Reporter software.
This Ion Reporter software gives the taxonomic results by regions or using a consensus of all the regions, where the results of each regions are added up. My questions is if the command
classify-consensus-vsearch does a similar consensus or not, as I am analyzing 7 regions instead of one.
Thank you so much in advanced