Hello! I was wondering if there is anyway to extract the numerical values associated with the important features in the heatmap obtained from running "qiime sample-classifier classify-samples"?
Hey there @redflag40!
Let us know how it goes!
We have looked at the feature_importance output before. What we are hoping we can find is the values for the colors in the heatmap between Q1 and Q2.
Those are the abundances of those features/samples in your feature table. You can follow the same advice as above (export or tabulate), but using the feature table, instead of the importances.