I am new to Qiime2. I am working on HPC, and I just loaded Qiime2 by using command:
module load apps/qiime/188.8.131.5260711/bin
After this If I run the import command, it shows error:
]$ qiime tools import --help
Usage: qiime tools [OPTIONS] COMMAND [ARGS]…
Error: No such command “import”.
[[email protected](kelvin) test_qiime2]$
Your quick help will be appreciated.
What version of qiime 2 are you running? You can run
qiime info to give us a detailed summary!
]$ qiime info
Python version: 3.5.2
QIIME version: 2.0.1.dev0
q2cli version: 0.0.0-dev
feature-table 0.0.0-dev (https://github.com/qiime2-plugins/q2-feature-table)
types 0.0.0-dev (https://github.com/qiime2/q2-types)
diversity 0.0.0-dev (https://github.com/qiime2/q2-diversity)
Wow! @Yogesh_Gupta - that is an unbelievably old version of QIIME 2! As you can tell, it is lacking things like
import functionality, and the many plugins that come bundled with QIIME 2 Core.
I suggest you talk to your sysadmin and see if they can deploy 2018.11 for you, the latest current version of QIIME 2.
Thank you very much for your quick help!
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