Hi Evan, yes, I had done a fresh rm / wget to refresh my copy of the yaml when Liz replied to me yesterday and relaunched my attempt to install the newest qiime2 version. Upon trying to find and update my conda versions, here's what I've got.
eicc:[~] % conda --version
conda 4.9.2
eicc:[~] % conda update conda
Collecting package metadata (current_repodata.json): done
Solving environment: |
The environment is inconsistent, please check the package plan carefully
The following packages are causing the inconsistency:
- conda-forge/linux-64::libgfortran4==7.5.0=h14aa051_18
done
## Package Plan ##
environment location: /home/rarthur/miniconda3
added / updated specs:
- conda
The following packages will be downloaded:
package | build
---------------------------|-----------------
ca-certificates-2022.9.24 | ha878542_0 150 KB conda-forge
certifi-2022.9.24 | pyhd8ed1ab_0 155 KB conda-forge
conda-22.9.0 | py38h578d9bd_0 974 KB conda-forge
conda-package-handling-1.9.0| py38h0a891b7_0 1023 KB conda-forge
contourpy-1.0.5 | py38h43d8883_0 234 KB conda-forge
fonttools-4.37.3 | py38h0a891b7_0 1.9 MB conda-forge
idna-3.4 | pyhd8ed1ab_0 55 KB conda-forge
libdeflate-1.13 | h166bdaf_0 79 KB conda-forge
libtiff-4.4.0 | h0e0dad5_3 642 KB conda-forge
matplotlib-base-3.6.0 | py38hb021067_0 7.5 MB conda-forge
numpy-1.23.3 | py38h3a7f9d9_0 7.1 MB conda-forge
pyopenssl-22.0.0 | pyhd8ed1ab_1 120 KB conda-forge
pysam-0.19.1 | py38h1c8baaf_1 2.7 MB bioconda
requests-2.28.1 | pyhd8ed1ab_1 53 KB conda-forge
setuptools-65.4.0 | pyhd8ed1ab_0 731 KB conda-forge
sqlite-3.39.3 | h4ff8645_0 789 KB conda-forge
toolz-0.12.0 | pyhd8ed1ab_0 48 KB conda-forge
tqdm-4.64.1 | pyhd8ed1ab_0 82 KB conda-forge
urllib3-1.26.11 | pyhd8ed1ab_0 102 KB conda-forge
------------------------------------------------------------
Total: 24.3 MB
The following NEW packages will be INSTALLED:
contourpy conda-forge/linux-64::contourpy-1.0.5-py38h43d8883_0
toolz conda-forge/noarch::toolz-0.12.0-pyhd8ed1ab_0
The following packages will be UPDATED:
ca-certificates 2022.6.15-ha878542_0 --> 2022.9.24-ha878542_0
certifi 2022.6.15-pyhd8ed1ab_1 --> 2022.9.24-pyhd8ed1ab_0
conda 4.9.2-py38h578d9bd_0 --> 22.9.0-py38h578d9bd_0
conda-package-han~ 1.8.1-py38h0a891b7_1 --> 1.9.0-py38h0a891b7_0
fonttools 4.37.1-py38h0a891b7_0 --> 4.37.3-py38h0a891b7_0
idna 3.3-pyhd8ed1ab_0 --> 3.4-pyhd8ed1ab_0
lerc 3.0-h9c3ff4c_0 --> 4.0.0-h27087fc_0
libdeflate 1.10-h7f98852_0 --> 1.13-h166bdaf_0
libpng 1.6.37-h753d276_4 --> 1.6.38-h753d276_0
libsqlite 3.39.2-h753d276_1 --> 3.39.3-h753d276_0
libtiff 4.4.0-h0fcbabc_0 --> 4.4.0-h0e0dad5_3
libzlib 1.2.12-h166bdaf_2 --> 1.2.12-h166bdaf_3
matplotlib-base 3.5.3-py38h38b5ce0_2 --> 3.6.0-py38hb021067_0
numpy 1.23.2-py38h3a7f9d9_0 --> 1.23.3-py38h3a7f9d9_0
pyopenssl pkgs/main::pyopenssl-19.1.0-pyhd3eb1b~ --> conda-forge::pyopenssl-22.0.0-pyhd8ed1ab_1
pysam 0.19.1-py38h8bf8b8d_0 --> 0.19.1-py38h1c8baaf_1
requests 2.28.1-pyhd8ed1ab_0 --> 2.28.1-pyhd8ed1ab_1
setuptools 65.3.0-pyhd8ed1ab_1 --> 65.4.0-pyhd8ed1ab_0
sqlite 3.39.2-h4ff8645_1 --> 3.39.3-h4ff8645_0
tqdm 4.64.0-pyhd8ed1ab_0 --> 4.64.1-pyhd8ed1ab_0
urllib3 pkgs/main::urllib3-1.25.11-py_0 --> conda-forge::urllib3-1.26.11-pyhd8ed1ab_0
zlib 1.2.12-h166bdaf_2 --> 1.2.12-h166bdaf_3
The following packages will be DOWNGRADED:
libblas 3.9.0-16_linux64_openblas --> 3.9.0-8_openblas
libcblas 3.9.0-16_linux64_openblas --> 3.9.0-8_openblas
libgfortran-ng 12.1.0-h69a702a_16 --> 7.5.0-h14aa051_18
liblapack 3.9.0-16_linux64_openblas --> 3.9.0-8_openblas
libopenblas 0.3.21-pthreads_h78a6416_2 --> 0.3.12-pthreads_hb3c22a3_1
Downloading and Extracting Packages
numpy-1.23.3 | 7.1 MB | ######################################################### | 100%
conda-package-handli | 1023 KB | ######################################################### | 100%
toolz-0.12.0 | 48 KB | ######################################################### | 100%
tqdm-4.64.1 | 82 KB | ######################################################### | 100%
setuptools-65.4.0 | 731 KB | ######################################################### | 100%
ca-certificates-2022 | 150 KB | ######################################################### | 100%
certifi-2022.9.24 | 155 KB | ######################################################### | 100%
urllib3-1.26.11 | 102 KB | ######################################################### | 100%
idna-3.4 | 55 KB | ######################################################### | 100%
contourpy-1.0.5 | 234 KB | ######################################################### | 100%
conda-22.9.0 | 974 KB | ######################################################### | 100%
matplotlib-base-3.6. | 7.5 MB | ######################################################### | 100%
sqlite-3.39.3 | 789 KB | ######################################################### | 100%
libdeflate-1.13 | 79 KB | ######################################################### | 100%
fonttools-4.37.3 | 1.9 MB | ######################################################### | 100%
pyopenssl-22.0.0 | 120 KB | ######################################################### | 100%
requests-2.28.1 | 53 KB | ######################################################### | 100%
libtiff-4.4.0 | 642 KB | ######################################################### | 100%
pysam-0.19.1 | 2.7 MB | ######################################################### | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
eicc:[~] %
eicc:[~] % conda --version
conda 22.9.0
By the way, is there an edit button somewhere? I don't want to multipost and send off too many alert emails. Trying to be courteous. Thanks!