Hi, i'm having problems with qzv visualizations when running qiime tools view command from the terminal (ubuntu).
Things i've already tried unsuccesfully:
- changing TMPDIR before or after activating the conda env
- using different qiime versions envs (the 2019-01 and older ones)
PS: using https://view.qiime2.org/ works, but it is impractical for me.
Here I paste my results:
(qiime2.11) juan@ip:~/x$ qiime tools view x-taxa-bar-plots-dada2.qzv
Press the 'q' key, Control-C, or Control-D to quit. This view may no longer be accessible or work correctly after quitting.Traceback (most recent call last):
File "/home/usuario/anaconda2/envs/qiime2.11/bin/qiime", line 11, in
sys.exit(qiime())
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/core.py", line 764, in call
return self.main(*args, **kwargs)
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/core.py", line 717, in main
rv = self.invoke(ctx)
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/core.py", line 1137, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/core.py", line 1137, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/core.py", line 956, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/core.py", line 555, in invoke
return callback(*args, **kwargs)
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/q2cli/tools.py", line 320, in view
char = click.getchar()
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/termui.py", line 572, in getchar
return f(echo)
File "/home/usuario/anaconda2/envs/qiime2.11/lib/python3.5/site-packages/click/_termui_impl.py", line 616, in getchar
ch = os.read(fd, 32)
BlockingIOError: [Errno 11] Resource temporarily unavailable
Created new window in existing browser session.
Thanks in advance!