I am a QIIME2 user. I am using a computer with MacOs Catalina 10.15.7. I installed anaconda3 and QIIME2 according to https://qiime2.org. However, I cannot use QIIME2 because I cannot work the command like quine --help.
I may be able to work only qiime2-tiny-2023.9 but on the others not work.
Let me explain my problem below.
Options:
--version Show the version and exit.
--help Show this message and exit.
Commands:
info Display information about current deployment.
tools Tools for working with QIIME 2 files.
dev Utilities for developers and advanced users.
(qiime2-tiny-2023.9) seita@SEITA-no-MacBook-Air ~ % conda deactivate
And what does ls /Users/seita/anaconda3/envs/qiime2-amplicon-2023.9/bin | grep qiime return (with the environment activated)? What about when your run the deblur command with your environment activated?
(qiime2-amplicon-2023.9) seita@SEITA-no-Air ~ % ls /Users/seita/anaconda3/envs/qiime2-amplicon-2023.9/bin | grep qiime
ls: no such file or directory: Users/seita/anaconda3/envs/qiime2-amplicon-2023.9/bin
When I ran the command on the above, I was told that there is no such file or directly, so I tried to move the file of "qiime2-amplicon-2023.9" and run "ls", the answer was below.
(qiime2-amplicon-2023.9) seita@SEITA-no-Air qiime2-amplicon-2023.9 % ls
conda-meta etc lib share var
I think there does not exist the file of "bin" in the "qiime2-amplicon-2023.9".
Next, I ran deblur command with my environment activated. The result is below.