Dear Team
I want conduct the diversity metrics
i used the following commands,
qiime diversity core-metrics-phylogenetic
--i-phylogeny rooted-tree.qza
--i-table table.qza
--p-sampling-depth 10000
--m-metadata-file metadata.tsv
--output-dir core-metrics-results
But
Getting errors, i could not figure out the cause, anyone who can assist
Plugin error from diversity:
None of the sample identifiers match between the metadata and the coordinates. Verify that you are using metadata and coordinates corresponding to the same dataset.
the error are
Traceback (most recent call last):
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/q2cli/commands.py", line 520, in call
results = self._execute_action(
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/q2cli/commands.py", line 586, in _execute_action
results = action(**arguments)
File "", line 2, in core_metrics_phylogenetic
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/qiime2/sdk/action.py", line 342, in bound_callable
outputs = self.callable_executor(
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/qiime2/sdk/action.py", line 657, in callable_executor
outputs = self._callable(scope.ctx, **view_args)
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/q2_diversity/_core_metrics.py", line 60, in core_metrics_phylogenetic
cr = core_metrics(table=table, sampling_depth=sampling_depth,
File "", line 2, in core_metrics
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/qiime2/sdk/context.py", line 143, in deferred_action
return action_obj._bind(
File "", line 2, in core_metrics
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/qiime2/sdk/action.py", line 342, in bound_callable
outputs = self.callable_executor(
File "/home/meda/miniconda3/envs/qiime2-amplicon-2024.5/lib/python3.9/site-packages/qiime2/sdk/action.py", line 657, in callable_executor
outputs = self._callable(scope.ctx, **view_args)
raise ValueError('None of the %s identifiers match between the'
ValueError: None of the sample identifiers match between the metadata and the coordinates. Verify that you are using metadata and coordinates corresponding to the same dataset.