I currently have the version 2.0.5 of Qiime installed on my cluster.
I’d like to upgrade it to the just-released newer version.
I tried to activate the environment as root and then:
conda update qiime2
But conda answers that the currently installed version (2.0.5) is up-to-date already.
Many thanks for your support !
PS: As you may know, I used the following commands to install Qiime2 from scratch:
conda create --name qiime2 -c bioconda -c r bioconductor-dada2 mafft
source activate qiime2
conda install -c qiime2 python=3.5 qiime q2cli
conda install matplotlib==1.5.1
conda install -c qiime2 q2-types q2-feature-table
conda install -c qiime2 -c conda-forge q2-diversity q2-emperor emperor=1.0.0beta5
conda install -c biocore fasttree
conda install -c qiime2 q2-demux q2-alignment q2-phylogeny q2-dada2 q2-composition