Thanks again for making everything clear. I’m going to use SCNIC for my feature table without any normalization. I’m installing SCNIC at the moment and unfortunately I had some errors while executing this command
conda install -c lozuponelab q2-SCNIC
The error is as follows:
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): /
nsatisfiableError: The following specifications were found
to be incompatible with the existing python installation in your environment:
Specifications:
- q2-scnic -> python=3.5
Your python: python=2.7
If python is on the left-most side of the chain, that’s the version you’ve asked for.
When python appears to the right, that indicates that the thing on the left is somehow
not available for the python version you are constrained to. Note that conda will not
change your python version to a different minor version unless you explicitly specify
that.
The following specifications were found to be incompatible with each other:
Package bzip2 conflicts for:
python=2.7 -> bzip2[version=’>=1.0.6,<2.0a0’]
Package ncurses conflicts for:
python=2.7 -> ncurses[version=‘5.9.|6.0.|>=6.0,<7.0a0|>=6.1,<6.2.0a0|>=6.1,<7.0a0’]
Package zlib conflicts for:
python=2.7 -> zlib[version=‘1.2.|1.2.11.|1.2.11|1.2.8|>=1.2.11,<1.3.0a0’]
Package openssl conflicts for:
python=2.7 -> openssl[version=‘1.0.|1.0.,>=1.0.2l,<1.0.3a|>=1.0.2m,<1.0.3a|>=1.0.2n,<1.0.3a|>=1.0.2o,<1.0.3a|>=1.0.2p,<1.0.3a|>=1.1.1a,<1.1.2a|>=1.1.1b,<1.1.2a|>=1.1.1c,<1.1.2a|>=1.1.1d,<1.1.2a’]
Package sqlite conflicts for:
python=2.7 -> sqlite[version=‘3.13.|3.20.|>=3.20.1,<4.0a0|>=3.22.0,<4.0a0|>=3.23.1,<4.0a0|>=3.24.0,<4.0a0|>=3.25.2,<4.0a0|>=3.25.3,<4.0a0|>=3.26.0,<4.0a0|>=3.27.2,<4.0a0|>=3.28.0,<4.0a0|>=3.29.0,<4.0a0|>=3.30.0,<4.0a0’]
Package q2-types conflicts for:
q2-scnic -> q2-types[version=‘2018.11.|2018.8.|>=2016.6’]
Package libgcc-ng conflicts for:
python=2.7 -> libgcc-ng[version=’>=4.9|>=7.2.0|>=7.3.0’]
Package qiime2 conflicts for:
q2-scnic -> qiime2[version=‘2018.11.|2018.8.|>=2018.6’]
Package ca-certificates conflicts for:
python=2.7 -> ca-certificates
Package tk conflicts for:
python=2.7 -> tk[version=‘8.5.|8.6.|>=8.6.7,<8.7.0a0|>=8.6.8,<8.7.0a0|>=8.6.9,<8.7.0a0’]
Package libffi conflicts for:
python=2.7 -> libffi[version=‘3.2.*|>=3.2.1,<3.3.0a0|>=3.2.1,<4.0a0’]
Package pip conflicts for:
python=2.7 -> pip
Package libstdcxx-ng conflicts for:
python=2.7 -> libstdcxx-ng[version=’>=4.9|>=7.2.0|>=7.3.0’]
Package readline conflicts for:
python=2.7 -> readline[version=‘6.2.|7.|7.0.*|7.0|>=7.0,<8.0a0|>=8.0,<9.0a0’]
Package scnic conflicts for:
q2-scnic -> scnic[version=’>=0.5.3|>=0.6.*’]
Sorry to bother again!!!