Check it out in all of its glory.
I’ve run a few data sets via the plugin, and everything appears sane. I would greatly like any feedback on this. Especially, if there are some coding guidelines I’ve not properly followed. Ideas for other unit tests are welcome too. If this looks good, I’ll start on implementing IQ-TREE into the q2-phylogeny plugin like we discussed. In which case I’ll submit a pull request to add the IQ-TREE dependency.
I plan to add the bootstraping capability at a later date. I’d rather wait until I am confident all the basics down for RAxML and IQ-TREE. I figured returning a single tree would be sufficient for now…