Hi @cduvallet Thank you so much for making this plug-in available. I would like to use it to correct for major batch effect we have in our data (apparent in PCoA plots and stat. sig when running ADONIS). After making the appropriate columns in the metadata ("#SampleID", "DiseaseState", "batch"), …

Hi Hind, Glad to hear you're using the plugin! What version of QIIME 2 are you using? You need to update to the latest version, since I moved the PercentileNormalized declaration to the q2-types plugin (in older versions of QIIME 2, it was contained within the q2-perc-norm plugin directly). Let me …

Hi @cduvallet That was exactly the issue :slight_smile: I am now using Qiime2-2018.8 and your plugin (almost) works...:pensive: I hope you can help with this new bug. Here are my steps: Make appropriate columns in metadata file for percentile normalization MetadataOct2018$batch <- paste("batch"…

[image] Q2-perc-norm community plugin The following IDs are not present in the metadata: ‘“7104722413”’, ‘“7104723114”’, ‘“7104723314”’, […] This error means that you have sample IDs in the OTU table which are not in the metadata. You should double-check that the sample IDs in the biom file (o…

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Q2-perc-norm - ImportError: cannot import name ‘PercentileNormalized’

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