I am searching for a plugin which can return quality data in a table format for a demultiplexed qza file. At a minimum, it should provide number of reads at a position, mean score, and quartiles.
I am currently having an issue where the subsampling is misrepresenting several of my data sets compared to a FASTX report or when viewed in FASTQC. I would rather my entire pipeline be within the QIIME2 environment for tracking purposes.
(Sorry for the duplicate submission. I accidently clicked Create Topic before completion.)