I am fairly new to using QIIME 2 but wanted to use the PiCRUST2 plug. I therefore installed (successfully) QIIME 2 (version 2019.1) using conda and then used the code described at :
The only modification I made was for the version of QIIME 2.
The installation of PICRUST 2 seemed to have worked as I received a message to say that this was successful.
I then went to add the plugin using the q2-picrust2-0.0.2.zip
The python script seemed to run but then when I went to check using
I received the following error message:
File “/Applications/anaconda2/envs/qiime2-2019.1/lib/python3.6/site-packages/q2_picrust2-0.0.2-py3.6.egg/q2_picrust2/_full_pipeline.py”, line 6, in <module>
from q2_types.feature_table import FeatureTable, Frequency
ModuleNotFoundError: No module named 'q2_types’
I checked in the QIIME folder and noticed that several plug ins had been removed from the environment (including q2_types). I therefore uninstalled QIIME 2 and repeated the installation only to find the same error and the same loss of QIIME packages. I would be grateful for advice on how to fix this problem.
I am working in macOS Mojave v10.14.