I am using qiime taxa filter-table to filter one of my studies (with 295 samples). I used the following command:
qiime taxa filter-table --i-table pig_table_clustered.qza --i-taxonomy taxonomy-295.qza --o-filtered-table filter_pig_clustered.qza
here, pig_table_clustered.qza is the table obtained after denovo clustering taxonomy-295.qza is the taxonomic classification output
error:
Plugin error from taxa:
CategoricalMetadataColumn does not support values with leading or trailing whitespace characters. Column ‘Taxon’ has the following value: 'D_0__Bacteria;D_1__Firmicutes;D_2__Bacilli;D_3__Lactobacillales;D_4__Carnobacteriaceae;D_5__Alloiococcus;D_6__bacterium '
Hi @SAHIL_JAIN_16110144,
The error here is telling us that it doesn’t like the blank white space at the end of your taxonomy annotations: 'D_0__Bacteria;D_1__Firmicutes;D_2__Bacilli;D_3__Lactobacillales;D_4__Carnobacteriaceae;D_5__Alloiococcus;D_6__bacterium '