Hello. I am trying to do alpha and beta diversity analyses with AGP (American Gut Project) data and am getting the error shown below the second chunk of code shown below. data.qza is a feature table which is deblurred sequences downloaded from redbiom.
Any help would be greatly appreciated! Thank you
qiime phylogeny align-to-tree-mafft-fasttree \
qiime diversity core-metrics-phylogenetic \
Plugin error from diversity:
The table does not appear to be completely represented by the phylogeny.