I am new in qiime. When I enter "qiime diversity core-metrics-phylogenetic --i-phylogeny rooted_tree.qza --i-table table.qza --p-sampling-depth 2500 --m-metadata-file metadata.tsv --output-dir core_metrics_results" command, following error occured
Plugin error from diversity:
None of the sample identifiers match between the metadata and the coordinates. Verify that you are using metadata and coordinates corresponding to the same dataset.
Attached metadata tsv
my metadata.tsv (971 Bytes)
I would recommend using qiime feature-table summarize to look at the sample IDs in your table and the sequencing depth. You need to verify those match with your metadata, otherwise almost nothing will work.
Looking at your metadata, you will also (eventually) want to add some information that's more relevant to your biological question.