I believe my data lack a specific taxon that is usually dominant in the literature. Is there a way to confirm this finding using qiime2 or any other software?
Also, how do I know this taxa's specific abundance in my data using qiime2?
My data is microbiome 16S sequences, and I do the analysis using qiime2 amplicon. For example, I want to know the percentage of Cutibacterium acnes that is present in my data. How to do so?
1 Like
4 off-topic replies have been merged into an existing topic: Specific taxa abundance
Please keep replies on-topic in the future.