Percentage not in csv downloaded from bar plot display section

I see percentage in this bar plot but it does not show up when I download the file in CSV. How can I get that percentage in my CSV table? is there any other way to do it?

Hi @saryal2,
Welcome to the forum!
The relative abundances are calculated for the visualization only, so if you wanted those values you have 2 options:
A) download the total frequency CSV as you have and simply transform those to relative abundance in your favorite data management software.
B) Use the feature-table relative-frequency action to convert your feature-table into a relative abundance table, then you can export this table as a biom table as described here. Then you can use the biom table or convert it to a text file with:

biom convert --to-tsv -i feature-table.biom -o table.tsv

Happy Qiimin’


Thank you Mehrbod_Estaki!

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