Native Qiime2 installation on offline HPC

is there a workaround how to natively install the latest Qiime2 version at an offline server cluster?
Miniconda3 (v4.9.2) is already installed.

Air gapped? :upside_down_face:

You can install Qiime2 on an online / temporary / burner machine, then conda pack the full environment, audit it, and redeploy it without internet access. See:

You can also do this with Docker, if your security team prefers that:

1 Like

Jep, completely air gapped :partying_face:

I'll try the conda pack method, as Docker is not supportet yet...


1 Like

Cool, cool,

:closed_lock_with_key: :desert_island:

Please let me know how it goes. To the best of my knowledge, you are the first person to deploy Qiime2 in these conditions.

This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.