Memory issue using feature-classifier classify-sklearn

User Support
1

Hi

I am trying to assign taxonomy with qiime feature-classifier classify-sklearn \ using Silva database and I am having the MemoryError problem in the log. No memory issues when training the classifier. I am working with 8Gb RAM so I am a bit limited. Any suggestions to make the process less memory demanding?

Many thanks

2

See this post. Use the reads-per-batch parameter to reduce memory requirements by processing reads in smaller batches.

Good luck!

3

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