I am running Ubuntu 23.10 on a M2 Macbook Pro through UTM. I have difficulties installing qiime2:
wget https://data.qiime2.org/distro/amplicon/qiime2-amplicon-2024.2-py38-linux-conda.yml
conda env create -n qiime2-amplicon-2024.2 --file qiime2-amplicon-2024.2-py38-linux-conda.yml
I get an extremely long list of things that it cannot find/install/source (truncated):
Channels:
- https://packages.qiime2.org/qiime2/2024.2/amplicon/released
- bioconda
- conda-forge
- defaults
Platform: linux-aarch64
Collecting package metadata (repodata.json): done
Solving environment: failed
Channels:
- https://packages.qiime2.org/qiime2/2024.2/amplicon/released
- bioconda
- conda-forge
- defaults
Platform: linux-aarch64
Collecting package metadata (repodata.json): done
Solving environment: failed
LibMambaUnsatisfiableError: Encountered problems while solving:
- nothing provides bioconductor-s4vectors >=0.36.0,<0.37.0 needed by bioconductor-ancombc-2.0.1-r42hdfd78af_0
- nothing provides requested bioconductor-beachmat 2.14.0**
- nothing provides requested bioconductor-biobase 2.58.0**
- nothing provides requested bioconductor-biocneighbors 1.16.0**
- nothing provides requested bioconductor-biocparallel 1.32.5**
- nothing provides requested bioconductor-biocsingular 1.14.0**
[...]