ITS2 analysis SOP with QIIME 2?

Good day everyone,

I'm kinda new to this. Does anyone have a QIIME2 SOP for ITS2 that they can share with me?

Welcome to the forum @Bridget_Makhahlela !

I recommend looking at the "tutorials" section of this forum for some relevant materials. E.g., there is a tutorial for the q2-itsxpress plugin, as well as this tutorial that describes some more steps in a typical ITS analysis workflow:

Please check those out and open a new topic if you run into any more questions.

good luck!