Hello, new to docker and have no experience with anything like this. Please help.
I'm doing a project, which follows similarly the moving pictures tutorial. Any qiime related commands all fail, I've tried installing/reinstalling docker. Installed different versions of qiime and python. Restarting over again (To get stuck at same point), and following other forum posts. I've tried to restart using ubuntu, but no progress (Since was initially getting [Cannot connect to the Docker daemon at unix:///var/run/docker.sock. which i resolved). 64-bit operating system, x64-based processor.
I've installed Install miniconda, miniforge, q-2 fondue, imported my own NCBIAccessionIDs. All successfully so far.
Now i need to run: ''qiime demux summarize --i-data paired_reads.qza --o-visualization demuxsequence-summary.qzv''
and ''qiime dada2 denoise-paired\ '' -> etc.
The commands I'm currently running give:
(qiime2-2023.7) root@e9b4aff2f80c:/data# qiime demux summarize --i-data paired_reads.qza --o-visualization demuxsequence-summary.qzv
Illegal instruction
(base) root@e9b4aff2f80c:/data# qiime demux summarize --i-data paired_reads.qza --o-visualization demuxsequence-summary.qzv
QIIME is caching your current deployment for improved performance. This may take a few moments and should only happen once per deployment.
Illegal instruction
or:
(base) root@e9b4aff2f80c:/data# qiime demux summarize --i-data paired_reads.qza --o-visualization demuxsequence-summary.qzv
QIIME is caching your current deployment for improved performance. This may take a few moments and should only happen once per deployment.
Illegal instruction
No matter what environment I'm in it gives illegal instruction, no other details.
I installed qiime with:
However using condalist i only see q2 related packages in the (qiime2-2023.7) environment. Please help. Thank you!