I am try to get the feature table summary with the following command:
qiime feature-table summarize --i-table table1.qza --o-visualization table1.qzv --m-sample-metadata-file 16s-obj1-metadata.tsv
I keep getting the following error:
**There was an issue with loading the file 16s-obj1-metadata.tsv as metadata:** **Found unrecognized ID column name '<!DOCTYPE html>' while searching for header. The first column name in the header defines the ID column, and must be one of these values:** **Case-insensitive: 'feature id', 'feature-id', 'featureid', 'id', 'sample id', 'sample-id', 'sampleid'** **Case-sensitive: '#OTU ID', '#OTUID', '#Sample ID', '#SampleID', 'sample_name'** **There may be more errors present in the metadata file. To get a full report, sample/feature metadata files can be validated with Keemei: https://keemei.qiime2.org** **Find details on QIIME 2 metadata requirements here: https://docs.qiime2.org/2019.4/tutorials/metadata/**
My metadata file looks like in the attached screenshot. I have successfully validated with Keemei in Safari and then Chrome, changed column names, omitted some columns, nothing works. And I have read and re-read the metadata tutorial. I have run one succesful complete analysis before.
To download the metadata file, I did:
wget -O "16s-obj11-metadata.tsv" "https://docs.google.com/spreadsheets/d/1BOtYXnoCkj3XpnskzcJQyse_8j93Vrtq1ILsJJ0Fkuo/edit#gid=0"
I have read here that other people have experienced a similar problem before but I cant seem to find a solution that works for me.