A consistent sore point for users is converting their feature tables to qiime2 artifacts.
It may be easier if we have a transformer that explicitly converts biom table (version 1 text files) to qiime2 artifacts. It shouldn’t be crazy given that the transformer can accept multiple file formats.
To give some context what the current error looks like, when I try to run the following command, I get the following error.
qiime tools import --input-path Microbiomematched.biom --output-path Microbiomematched.qza --type FeatureTable[Frequency] There was a problem importing Microbiomematched.biom: Microbiomematched.biom is not a(n) BIOMV210Format file