Hello. Trying to figure out how to interpret diversity results. I do not fully understand the output for alpha-group signficance plots. What is the H value for the Kruskal-Wallis pairwise test? And is there an easier way to get value for Faith’s PD or Shannon values per group other than downloading the raw table and calculating them myself? I know the program is calculating the median as well as quartiles because it is plotting them on the boxplot, but I would like to be able to report the exact numbers for each group and don’t see that output anywhere. Attaching a screenshot for reference. Thank you!
Have you tried searching the forum? There are several threads about interpreting these results.
I think you will find this Topic and many others super helpful:
Don’t hesitate to follow up here with more questions after reading the above discussion and any others that you might find while searching the forum.
As for you other question:
I need to do a bit more investigation and will get back to you about it.