Hi! I've been trying to install Qiime2 but I'm getting a "unexpected error" when creating a conda environment. I checked previous posts and I tried removing the qiime2-2021.11-py38-osx-conda.yml file and downloading it again but still didn't work.
Thanks
Here is the error message:
conda env create -n qiime2-2021.11 --file qiime2-2021.11-py38-osx-conda.yml
Collecting package metadata (repodata.json): failed
>>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/exceptions.py", line 1062, in __call__
return func(*args, **kwargs)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda_env/cli/main.py", line 73, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda_env/cli/main_create.py", line 101, in execute
installer.install(prefix, pkg_specs, args, env)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda_env/installers/conda.py", line 27, in install
unlink_link_transaction = solver.solve_for_transaction(prune=getattr(args, 'prune', False))
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/solve.py", line 116, in solve_for_transaction
should_retry_solve)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/solve.py", line 157, in solve_for_diff
force_remove, should_retry_solve)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/solve.py", line 261, in solve_final_state
ssc = self._collect_all_metadata(ssc)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/common/io.py", line 88, in decorated
return f(*args, **kwds)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/solve.py", line 414, in _collect_all_metadata
index, r = self._prepare(prepared_specs)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/solve.py", line 999, in _prepare
self.subdirs, prepared_specs, self._repodata_fn)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/index.py", line 214, in get_reduced_index
repodata_fn=repodata_fn)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/subdir_data.py", line 95, in query_all
result = tuple(concat(executor.map(subdir_query, channel_urls)))
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/concurrent/futures/_base.py", line 641, in result_iterator
yield fs.pop().result()
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/concurrent/futures/_base.py", line 462, in result
return self.__get_result()
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/concurrent/futures/thread.py", line 63, in run
result = self.fn(*self.args, **self.kwargs)
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/subdir_data.py", line 88, in <lambda>
package_ref_or_match_spec))
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/subdir_data.py", line 100, in query
self.load()
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/subdir_data.py", line 164, in load
_internal_state = self._load()
File "/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/lib/python2.7/site-packages/conda/core/subdir_data.py", line 260, in _load
fh.write(raw_repodata_str or '{}')
IOError: [Errno 122] Disk quota exceeded
$ /opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/bin/conda-env create -n qiime2-2021.11 --file qiime2-2021.11-py38-osx-conda.yml
environment variables:
CIO_TEST=
CONDA_AUTO_UPDATE_CONDA=false
CONDA_EXE=/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/bin/conda
CONDA_PYTHON_EXE=/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/bin/python
CONDA_ROOT=/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10
CONDA_SHLVL=0
CPATH=/opt/linux/centos/7.x/x86_64/pkgs/gdal/2.1.3/include:/opt/linux/centos
/7.x/x86_64/pkgs/ggobi/2.1.11/include/ggobi:/opt/linux/centos/7.x/x86_
64/pkgs/R/4.0.1/lib64/R/include:/opt/linux/centos/7.x/x86_64/pkgs/open
mpi/4.0.1-slurm-19.05.0/include
C_INCLUDE_PATH=/opt/linux/centos/7.x/x86_64/pkgs/java/jdk1.8.0_45/include:/opt/linux/
centos/7.x/x86_64/pkgs/slurm/19.05.0/include
INCLUDE_PATH=/opt/linux/centos/7.x/x86_64/pkgs/libiconv/1.16/include:/opt/linux/cen
tos/7.x/x86_64/pkgs/geos/3.7.1/include
LD_LIBRARY_PATH=/opt/linux/centos/7.x/x86_64/pkgs/libiconv/1.16/lib:/opt/linux/centos/
7.x/x86_64/pkgs/hdf5/1.10.1/lib:/opt/linux/centos/7.x/x86_64/pkgs/gdal
/2.1.3/lib:/opt/linux/centos/7.x/x86_64/pkgs/geos/3.7.1/lib:/opt/linux
/centos/7.x/x86_64/pkgs/java/jdk1.8.0_45/lib:/opt/linux/centos/7.x/x86
64/pkgs/java/jdk1.8.0_45/jre/lib/amd64/server:/opt/linux/centos/7.x/x
86_64/pkgs/netcdf/4.4.1.1/lib:/opt/linux/centos/7.x/x86_64/pkgs/ggobi/
2.1.11/lib:/opt/linux/centos/7.x/x86_64/pkgs/R/4.0.1/lib64/R/lib:/opt/
linux/centos/7.x/x86_64/pkgs/openmpi/4.0.1-slurm-19.05.0/lib:/opt/linu
x/centos/7.x/x86_64/pkgs/openmpi/4.0.1-slurm-19.05.0/lib/openmpi:/opt/
linux/centos/7.x/x86_64/pkgs/slurm/19.05.0/lib
LIBRARY_PATH=/opt/linux/centos/7.x/x86_64/pkgs/gdal/2.1.3/lib:/opt/linux/centos/7.x
/x86_64/pkgs/R/4.0.1/lib64/R/lib:/opt/linux/centos/7.x/x86_64/pkgs/ope
nmpi/4.0.1-slurm-19.05.0/lib
MANPATH=/opt/linux/centos/7.x/x86_64/pkgs/vim/8.1/share/man:/opt/linux/centos/
7.x/x86_64/pkgs/libiconv/1.16/share/man:/opt/linux/centos/7.x/x86_64/p
kgs/java/jdk1.8.0_45/man:/opt/linux/centos/7.x/x86_64/pkgs/netcdf/4.4.
1.1/share/man:/opt/linux/centos/7.x/x86_64/pkgs/ggobi/2.1.11/share/man
:/opt/linux/centos/7.x/x86_64/pkgs/R/4.0.1/share/man:/opt/linux/centos
/7.x/x86_64/pkgs/openmpi/4.0.1-slurm-19.05.0/share/man:/opt/linux/cent
os/7.x/x86_64/pkgs/slurm/19.05.0/share/man::
MODULEPATH=/usr/share/modulefiles:/opt/linux/centos/7.x/x86_64/modules
PATH=/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/bin:/opt/linux/cen
tos/7.x/x86_64/pkgs/miniconda2/4.4.10/bin:/opt/linux/centos/7.x/x86_64
/pkgs/vim/8.1/bin:/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/
bin:/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/bin:/opt/linux
/centos/7.x/x86_64/pkgs/hpcc_user_utils/bin:/opt/linux/centos/7.x/x86
64/pkgs/libiconv/1.16/bin:/opt/linux/centos/7.x/x86_64/pkgs/hdf5/1.10.
1/bin:/opt/linux/centos/7.x/x86_64/pkgs/gdal/2.1.3/bin:/opt/linux/cent
os/7.x/x86_64/pkgs/geos/3.7.1/bin:/opt/linux/centos/7.x/x86_64/pkgs/ja
va/jdk1.8.0_45/bin:/opt/linux/centos/7.x/x86_64/pkgs/netcdf/4.4.1.1/bi
n:/opt/linux/centos/7.x/x86_64/pkgs/pandoc/2.9.2.1/bin:/opt/linux/cent
os/7.x/x86_64/pkgs/texlive/2017/bin/x86_64-linux:/opt/linux/centos/7.x
/x86_64/pkgs/ggobi/2.1.11/bin:/opt/linux/centos/7.x/x86_64/pkgs/R/4.0.
1/bin:/opt/linux/centos/7.x/x86_64/pkgs/openmpi/4.0.1-slurm-19.05.0/bi
n:/opt/linux/centos/7.x/x86_64/pkgs/slurm/19.05.0/bin:/opt/linux/cento
s/7.x/x86_64/pkgs/slurm/19.05.0/sbin:/usr/bin:/bin:/usr/local/games:/u
sr/games:/usr/local/bin:/usr/lpp/mmfs/bin:/opt/ibutils/bin
PYTHONPATH=
REQUESTS_CA_BUNDLE=
SSL_CERT_FILE=
active environment : None
shell level : 0
user config file : /rhome/marcosvc/.condarc
populated config files :
conda version : 4.7.11
conda-build version : not installed
python version : 2.7.15.final.0
virtual packages :
base environment : /opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10 (read only)
channel URLs : main/linux-64
main/noarch
r/linux-64
r/noarch
package cache : /opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/pkgs
/rhome/marcosvc/.conda/pkgs
envs directories : /rhome/marcosvc/.conda/envs
/opt/linux/centos/7.x/x86_64/pkgs/miniconda2/4.4.10/envs
platform : linux-64
user-agent : conda/4.7.11 requests/2.22.0 CPython/2.7.15 Linux/3.10.0-1160.15.2.el7.x86_64 centos/7.9.2009 glibc/2.17
UID:GID : 4443:1233
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?