Importing fastaq (paired sequences in one file) for qiime2

[andrewsanchez]

Hi, @Nayeli_Luis_Vargas!

I will look further into this tomorrow (today is a Holiday in the states). In the mean time, you may find this forum tutorial helpful:

Importing and Demultiplexing Sequence Data Quick Reference

The following is a “pocket guide” to determining the appropriate methods for importing and demultiplexing FASTA/FASTQ sequences (primarily from marker-gene sequencing experiments). Many samples are often “multiplexed” (pooled and sequenced together) on a single sequencing run. So the first step to analyzing these data is to demultiplex the data. Often, demultiplexing is performed automatically by sequencing centers/services and users. How can you tell if you have demultiplexed data? If you have …