Importing a phylogenetic tree created using the SEPP package, rooted or unrooted?

Is the resulting tree created using the sepp-package rooted (@wasade would know)?

What tree viewing software do you recommend for quickly checking 16S rRNA trees? I would like to import my tree into QIIME2, but sure whether to use --type Phylogeny[Rooted] or [Unrooted]

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Hi @jessicalmetcalf, it is and the type Phylogeny[Rooted] is correct. Note that a q2-fragment-insertion plugin is available here which wraps SEPP.

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