I've been trying to use q2-woltka to analyze whole genome shotgun sequence data. I've downloaded the sequence data with the help of the q2-fondue plugin.
So now what I have is the following files,
The problem is q2-woltka accepts FeatureData[SeqAlnMap | PaimApFmt | BLAST6Out | SimpleMap] type of data where my paired_reads.qza file is SampleData[PairedEndSequencesWithQuality] type data.
Now my question is, how can I make qiime2 artefacts files into this semantic type?
Here is the link of q2-woltka supported semantic type,
