I'm quite perplexed by the taxonomy classification in high-throughput sequencing data. Could anyone provide assistance?

[crusher083 (Valentyn Bezshapkin)]

Hello,

Highly likely a different region of 16S is sequenced and you need to find out primers and make a custom classifier using:Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt

Cheers
V