in QIIME2

Does QIIME2 have a similar function to in QIIME1? I have paired samples from the same patient at two different time points. 15 patients in total. There is no grouping as such so can’t use longitudinal pairwise-differences without having a group.


longitudinal pairwise-differences is it.

We have an open issue to support single-group paired testing such as you have. This should come out in the next release, this April.

For now, there is a workaround described here

I hope that helps!

Thats great thank you!

This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.