Hi,
I have got community diversity files from MetONTIIME pipeline using Evaluate_diversity.sh command.
Here is my output files, please let know how I can visualize samples cluster of file (weighted_unifrac_emperor.qzv) in bar graph?
Any command or method ?
Hi @manojndsu,
My best recommendation would be to try qiime diversity beta-group-significance to test and visualize your data. This will take your distance matrix (weighted_unifrac_distance_matrix.qza) and it will give you boxplots showing the distribution of distances as well as statistics. It’s probably the easiest first pass way to view the data if you want a sense of the distributions.
Best,
Justine
Hi,
Thank you! For that command, do I need to install qiime first?
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