How to specify different alpha diversity metrics

How do I specify multiple metrics other than the default ones?


Right now, you cannot run multiple metrics in one command in Qiime2. However, it can be done using the Python API using a for loop. You can see an example here. Otherwise, you can just use a bash script and run each metric separately like they do here.

To see a list of all of the input options and their explanations, check out this list.



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