How to Import of PacBio seq data

Technical Support
3

Hi @baehsung,

You'll want to import your data as SingleEndFastqManifestPhred33V2, and then use denoise-ccs within DADA2 for your filtering. You can see an example for how to import PacBio data here, which includes reference to our denoise-ccs documentation as well.

Hope this helps! Cheers :lizard:

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