I need help (anyone!) importing paired-end data as single end, I did
qiime tools import --type 'SampleData[SequencesWithQuality]' --input-path its-obj1 --input-format CasavaOneEightSingleLanePerSampleDirFmt --output-path qiime-forwardreads-obj1/demux-singlefoward.qza
But got error
There was a problem importing its-obj1:
/tmp/q2-SingleLanePerSampleSingleEndFastqDirFmt-eo6_8gwa is not a(n) SingleLanePerSampleSingleEndFastqDirFmt: Forward and reverse reads found.
I have been reading other related posts in the forum trying to understand how to solve the challenge but cant seem to wrap my head around it.
How do I import forward/reverse reads only into a qiime artefact?
Thank you in advance for your patience and understanding.