Hello! First-time poster here so apologies if it isn't in the right spot. I just tried to run qiime fragment-insertion sepp with the SILVA reference database built from this script. I'm doing a meta-analysis on about 2700 samples (all 16S) and figured fragment-insertion was my best bet at making a r…

Good afternoon @kchhabria , Welcome to the Qiime 2 forums! :qiime2: I really appreciate your detailed post. There is a little more information that could be helpful. How large (MBs or GBs) is your input file? How much RAM / memory does your system have? Could you also post the full command you ran…

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fragment-insertion error

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