Hi Qiime community,
I was hoping to get some help creating a heatmap (qiime feature-table heatmap) that only contains the top 50 genera (abundance). I have successfully used qiime taxa collapse to create a collapsed table for genera data, but the corresponding heatmap is too long . Thus, I was hoping there would be a way to filter the features to show only the top genera.
In addition, I have 2 groups for comparison and would like to know if I could filter features to create a table that shows features that are present in all replicates for one group (exclusive to that one group) but not the other group. It would be really useful to compare which features are exclusive to each group.
Thank you for all your help!