Hi to all!!
I would like to get a feedback from you about which is the best way to get rid of some samples, once I got my Feature-Table and find out that some of them have a very low OTU counts with a previously selected p-depth. I have seen the Filtering Tutorial and I was thinking on approach the qiime feature-table filter-samples command, but I am not sure if there is a better way to do so.
Also I was wondering if there is specific command to establish a prevalence cut off at genera level in order to proceed with a more specific statistic analysis.
Thank you very much in advance for your help!!