Export QIIME2 qza file to MEGAN

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1

Hi QIIME2 experts,
I want to know if there is any easy way to create all inclusive QIIME2 biome file that can be exported to MEGAN?
Previously with QIIME1, I could create a biome file that could be easily fed into MEGAN. Is there a similar way now with QIIME2?
Thanks in advance,
Mitra

2

@Mitra,

I am not sure what BIOM format MEGAN requires, but artifacts of type FeatureTable[Frequency] have the data stored as BIOMV210. You can unzip the artifact and retrieve the '.biom' table from inside of the 'data' folder.

3

Thanks Keegan. Is there an easy way to chane the OTU IDs with taxa name? in the FeatureTable?
Thanks,
Mitra

5

@Mitra,

You will need to perform a taxonomic classification first. I would start by checking out this tutorial!

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