Error when running picrust2 plugin in qiime2-2020.2

Hi !
I have some trouble with installing q2-picrust2 plugin through condo.
I want to use picrust2 plugin.
I am following the this link.

The installation was successful.
but when I runned this code.
qiime picrust2 custom-tree-pipeline --help
That did not go well.

The error message appeared.↓
Error: QIIME 2 has no plugin/command named 'picrust2'.

Please see the actual screen.
γ‚Ήγ‚―γƒͺγƒΌγƒ³γ‚·γƒ§γƒƒγƒˆ 2020-04-01 18.23.15

I am glad if you tell me the solution.

1 Like

Hi @yoshikisuzu,
It looks like you installed picrust2, not q2-picrust2 (the QIIME 2 plugin for picrust2). You installed these in separate environments and they don’t know how to talk to each other!

You should follow the installation instructions here to install q2-picrust2 in your qiime2-2020.2 environment:
https://library.qiime2.org/plugins/q2-picrust2/13/

2 Likes

Thank you your polite advise.

I executed the program following your opinion.

but that did not go well.

Please see the actual screen.
The conflict error seems to occur.

I was wondering if it would be possible for you to advice me?
Thank you very much.

Dear @yoshikisuzu,
That error message is not very revealing, as it looks like you aborted the installation process. Please run again and wait until it produces a complete error message so that we can see what packages are in conflict.

Alternatively, install q2-picrust2 in your qiime2-2019.10 environment. As the picrust2 version is also 2019.10, it is possible that it has not been updated to be made compatible with qiime2-2020.2 and this is where the package conflict is arising.

Good luck!

1 Like