I am using qiime2-2019.10 and I like to run q2-picrust2. I followed installation steps in this link https://library.qiime2.org/plugins/q2-picrust2/13/
But " the plugin version for qiime2-2019.7 is specified"
So, I installed it from the source:
get https://github.com/picrust/picrust2/archive/v2.2.0-b.tar.gz tar xvzf v2.2.0-b.tar.gz cd picrust2-2.2.0-b/
Create and activate the environment (with requirements) and then install PICRUSt2 with pip.
conda env create -f picrust2-env.yaml conda activate picrust2 pip install --editable .
Run the tests to verify the installation (note that this wont work if you followed the bioconda install instructions):
so, when testing, I got this error;
FileNotFoundError: [Errno 2] No such file or directory: ‘picrust2_pipeline.py’: ‘picrust2_pipeline.py’
===================== 4 failed, 53 passed in 17.52 seconds =======
Is the latest version of q2-picrust2 only compatible with qiime2-2019.7 release?
I do not know what is wrong, I just follow the instructions!